genewise output
Score 237.60 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000655_2.0    3 VHPITRQISSSVQDNKQASHNICLSELKNCFIFDRHGDKKSFSSLFEHN 
                     V PITRQ++         S +I L ++++C+I+DR G    F +L++   
                     VSPITRQVTKEKLVFGNTSDDIRLEDVEDCLIYDRRGVSFPFKNLYQDR 
OMLM01014307.1:50000 gtcaaccgaagatgtgaatggaccgggggttatgccggttctaattcga 
                     tcctcgatcaaatttgaccaatgtaataagttaagggtctctaataaag 
                     taaataaacgaggatacttcttcgaccattattcatacttgtgcatacg 


SPP00000655_2.0   52 KAIVIFVR                       HFLCYTCKEYVEDLGKIP 
                     K+++IFVR                       +FLCY+CKEYV+DL KIP 
                     KSVIIFVR                       NFLCYSCKEYVDDLSKIP 
OMLM01014307.1:50147 atgaatgcGTAGGAA  Intron 1   CAGatcttatagtgggcaaac 
                     actttttg<0-----[50171:50426]-0>attgaggaaataatgatc 
                     accatcgg                       ccgccctaatgttgtaaa 


SPP00000655_2.0   78 QHVLQ                       DSNVRLVVIGQSSYSHIQ    
                     +  LQ                       D+ +RLVVIGQS Y HI+    
                     REALQ                       DAGIRLVVIGQSGYHHIE    
OMLM01014307.1:50481 aggccGTAAGTT  Intron 2   CAGgggaatggagctgtccag    
                     gacta<0-----[50496:50615]-0>acgtgttttgacgaaata    
                     aaggg                       ttctagtgttgtttttag    


SPP00000655_2.0  101                        GFCSLTGFPHEIYVDPERQIYKRLGL 
                                             FCSLTG+P+E+YVDP+R IY++LG+ 
                                            PFCSLTGYPYEMYVDPQRCIYQKLGM 
OMLM01014307.1:50670 GTAATTT  Intron 3   TAGctttcagtctgatggccatatcacga 
                     <0-----[50670:50924]-0>ctgctcgacaatatacaggtaaatgt 
                                            gccggggtttagtgcaggcttagcgg 


SPP00000655_2.0  127 RRGETYMET                          SVSPHVKSSMLSGS 
                      R E + ++                          + SPHVKS +  G  
                     TREEKFTDS          P:A[gca]        NPSPHVKSGIFMGH 
OMLM01014307.1:51003 aaggatagtGGTGAGGC  Intron 4   CAGCAacaccgatgatagc 
                     cgaaatcac <1-----[51031:51130]-1>  acgcatacgtttga 
                     aaggacact                          tttctggtttcgct 


SPP00000655_2.0  151 LKSVWRAMTSPVFDFQGDPQQQGGALIVGP                    
                     +KS+WRAMTSP FDFQGD  QQGGA+I GP                    
                     MKSIWRAMTSPAFDFQGDLHQQGGAIIAGP                    
OMLM01014307.1:51175 aaaatagaaacgtgtcggccccgggaaggc                    
                     tagtggctcgcctatagataaaggcttcgc                    
                     ggtaggtgtctacctgtcatgatacctaaa                    


SPP00000655_2.0  181                           PDVHFAHFDMNRLDHMPINWLLQ 
                                                 VHF+HFD NRLDHMPINWLLQ 
                               G:G[ggc]        SQVHFSHFDTNRLDHMPINWLLQ 
OMLM01014307.1:51265 GGTAAACT  Intron 5   CAGGCtcgcttctgaaccgcacaatccc 
                      <1-----[51266:51383]-1>  catatcatacagtaatctagtta 
                                               tgtttattcactgccgctcgggg 


SPP00000655_2.0  205 LAGLP-ALDFSDSPKIINI                               
                     LAG+   LDFSD PKI+++                               
                     LAGVQQTLDFSDKPKIVHV                               
OMLM01014307.1:51455 cgggccacgtagacaagcg                               
                     tcgtaactatgaacattat                               
                     ttatagtgccctgggcctg                               


//
Making a A in phase 1 intron
Making a G in phase 1 intron
>OMLM01014307.1:subseq(72950,69560).pep
VSPITRQVTKEKLVFGNTSDDIRLEDVEDCLIYDRRGVSFPFKNLYQDRKSVIIFVRNFL
CYSCKEYVDDLSKIPREALQDAGIRLVVIGQSGYHHIEPFCSLTGYPYEMYVDPQRCIYQ
KLGMTREEKFTDSANPSPHVKSGIFMGHMKSIWRAMTSPAFDFQGDLHQQGGAIIAGPGS
QVHFSHFDTNRLDHMPINWLLQLAGVQQTLDFSDKPKIVHV
//
>OMLM01014307.1:subseq(72950,69560).[50000:51511].sp
GTTTCACCAATAACTCGACAAGTAACCAAGGAAAAGTTGGTATTTGGAAACACTTCTGAC
GATATTCGCCTGGAAGACGTCGAAGATTGTTTAATTTATGACCGACGTGGAGTCTCTTTT
CCGTTTAAGAACTTATATCAAGACAGGAAATCCGTCATAATTTTCGTGCGGAACTTCCTG
TGCTACAGCTGTAAAGAATATGTGGATGATCTGAGTAAAATACCAAGAGAAGCGCTGCAG
GATGCTGGCATTAGATTGGTTGTGATTGGTCAGTCTGGTTATCATCATATAGAGCCGTTC
TGCTCGCTGACGGGGTATCCTTATGAAATGTATGTGGACCCACAGAGGTGCATTTATCAA
AAGCTCGGGATGACAAGAGAGGAGAAATTCACAGACTCTGCAAATCCTAGTCCCCATGTG
AAGTCTGGTATTTTCATGGGCCATATGAAGAGTATATGGAGGGCTATGACTAGCCCTGCA
TTCGACTTTCAGGGTGACCTACATCAGCAAGGTGGAGCCATCATTGCAGGACCAGGCTCT
CAGGTTCATTTTTCACATTTTGACACAAACCGTCTGGACCACATGCCCATTAACTGGCTG
CTGCAGCTTGCTGGAGTTCAACAGACTCTGGACTTCAGCGATAAGCCGAAGATCGTCCAT
GTG
//
OMLM01014307.1:subseq(72950,69560)	GeneWise	match	50000	51511	237.60	+	.	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	cds	50000	50170	0.00	+	0	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	intron	50171	50426	0.00	+	.	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	cds	50427	50495	0.00	+	0	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	intron	50496	50615	0.00	+	.	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	cds	50616	50669	0.00	+	0	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	intron	50670	50924	0.00	+	.	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	cds	50925	51030	0.00	+	0	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	intron	51031	51130	0.00	+	.	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	cds	51131	51265	0.00	+	2	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	intron	51266	51383	0.00	+	.	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
OMLM01014307.1:subseq(72950,69560)	GeneWise	cds	51384	51511	0.00	+	2	OMLM01014307.1:subseq(72950,69560)-genewise-prediction-1
//